Below you will find a collection of publications and useful links we have prepared for shared resource center collaborators and clients.

For more information regarding authorship and center acknowledgement guidelines, please visit our Resource User Policies hub.

Recent CIT Publications

  1. Stark RJ, Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA, Krispinsky LT, Lamb FS. ENDOTHELIAL-DEPENDENT VASCULAR REACTIVITY AFTER CARDIOPULMONARY BYPASS IS ASSOCIATED WITH UNIQUE METABOLOMIC SIGNATURES. Shock. 2024 Nov 1;62(5):656-662.
    DOI:
  2. Mouton AJ, Aitken NM, Morato JG, O’Quinn KR, do Carmo JM, da Silva AA, Omoto ACM, Li X, Wang Z, Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA, Stanford JK, Brown JA, Hall JE. Glutamine metabolism improves left ventricular function but not macrophage-mediated inflammation following myocardial infarction. Am J Physiol Cell Physiol. 2024 Sep 1;327(3):C571-C586.
    DOI:
  3. Westland MD, Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA, McClain MS, Cover TL. Taurine modulates host cell responses to Helicobacter pylori VacA toxin. Infect Immun. 2024 Aug 13;92(8):e0022424.
    DOI:
  4. Pfalzer AC, Shiino S, Silverman J, Codreanu SG, Sherrod SD, McLean JA, Claassen DO. Alterations in Cerebrospinal Fluid Urea Occur in Late Manifest Huntington’s Disease. J Huntingtons Dis. 2024;13(1):103-111.
    DOI:
  5. Schalich KM, Buendia MA, Kaur H, Choksi YA, Washington MK, Codreanu GS, Sherrod SD, McLean JA, Peek RM Jr, Acra SA, Townsend SD, Yan F. A human milk oligosaccharide prevents intestinal inflammation in adulthood via modulating gut microbial metabolism. mBio. 2024 Apr 10;15(4):e0029824.
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See the complete list

Suggested Reading

  • Leaptrot KL, May JC, Dodds JN, McLean JA, Ion mobility conformational lipid atlas for highconfidence lipidomics,ÌýNat. CommunÌý2019, 10:985.
    DOI:Ìý
  • Picache JA, Rose BS, Balinski A, Leaptrot KL, Sherrod SD, May JC, McLean JA,ÌýCollision cross section compendium to annotate and predict multi-omic compound identities,ÌýChem SciÌý2019,Ìý10, 983-993.
    DOI:Ìý
  • Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA, Untargeted Metabolomics Strategies – Challenges and Emerging Directions,ÌýJournal of the American Society for Mass SpectrometryÌý2016, 27:1897.
    DOI:
  • Patti GJ, Yanes O, Siuzdak G. Innovation: Metabolomics: the apogee of the omics trilogy. Nat Rev Mol Cell Biol. 2012 Mar 22;13(4):263-9.
    DOI:

Patents

  1. KL Leaptrot, JC May, JA McLean,ÌýMETHODS AND SYSTEMS FOR ION MOBILITY AND MASS ANALYSIS.
  2. Caprioli R., Wikswo J., McLean J., Skaar E., Norris J.L., Lacy D.B., Sherrod S., Pino J., Gutierrez D., Muszynski N.D., Farrow M. (2020) High-Throughput, Multi-Omics Approach to Determine and Validate De Novo Global Mechanisms of Action for Drugs and Toxins. .
  3. McLean, J. A., Russell, D. H., Egan, T. F., Ugarov, M. V. and Schultz, J. A. (2010) Multiplex Data Acquisition Modes for Ion Mobility-Mass Spectrometry.

Useful Links/Resources

  3. Ìýat ¹ú²ú´«Ã½
    Our collaborators for advanced statistical modeling and analysis of molecular omics results for basic science, translational, and clinical research projects
  4. (VMIC)
    VMIC coordinates and accelerates interdisciplinary scholarship to establish long-lasting resources in microbiome research and education. This effort brings together approximately 300 members (faculty, staff, students) from six ¹ú²ú´«Ã½ schools to understand, translate, and disseminate the principles that shape host-microbiome interactions, microbial genomics and metabolism, intimate symbiotic relationships, virology, epidemiology, statistical modeling, and applications for precision medicine.
  8. Metabolomics Databases/Libraries:
  9. Open Source Data AnalysisÌýSoftware: